Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.91■□□□□ 0.62
Cldn18P56857 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cldn18P56857 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Cldn18P56857 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Cldn18P56857 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cldn18P56857 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn18P56857 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn18P56857 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn18P56857 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cldn18P56857 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cldn18P56857 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cldn18P56857 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn18P56857 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Cldn18P56857 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.89■□□□□ 0.61
Cldn18P56857 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn18P56857 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.89■□□□□ 0.61
Cldn18P56857 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn18P56857 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn18P56857 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Cldn18P56857 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cldn18P56857 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.89■□□□□ 0.61
Cldn18P56857 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cldn18P56857 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn18P56857 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn18P56857 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn18P56857 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.88■□□□□ 0.61
Cldn18P56857 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.88■□□□□ 0.61
Cldn18P56857 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn18P56857 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn18P56857 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn18P56857 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cldn18P56857 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cldn18P56857 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn18P56857 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn18P56857 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn18P56857 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn18P56857 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.87■□□□□ 0.61
Cldn18P56857 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.87■□□□□ 0.61
Cldn18P56857 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn18P56857 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn18P56857 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn18P56857 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn18P56857 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn18P56857 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn18P56857 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn18P56857 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn18P56857 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn18P56857 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn18P56857 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn18P56857 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn18P56857 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.86■□□□□ 0.61
Cldn18P56857 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn18P56857 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn18P56857 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn18P56857 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.85■□□□□ 0.61
Cldn18P56857 Gm10399-202ENSMUST00000202768 748 ntBASIC18.85■□□□□ 0.61
Cldn18P56857 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn18P56857 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn18P56857 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn18P56857 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.84■□□□□ 0.61
Cldn18P56857 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.83■□□□□ 0.61
Cldn18P56857 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Cldn18P56857 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cldn18P56857 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.83■□□□□ 0.6
Cldn18P56857 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn18P56857 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn18P56857 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.83■□□□□ 0.6
Cldn18P56857 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn18P56857 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn18P56857 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cldn18P56857 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn18P56857 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.82■□□□□ 0.6
Cldn18P56857 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn18P56857 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.82■□□□□ 0.6
Cldn18P56857 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.82■□□□□ 0.6
Cldn18P56857 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.82■□□□□ 0.6
Cldn18P56857 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cldn18P56857 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn18P56857 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.82■□□□□ 0.6
Cldn18P56857 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn18P56857 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Cldn18P56857 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn18P56857 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn18P56857 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn18P56857 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.81■□□□□ 0.6
Cldn18P56857 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn18P56857 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn18P56857 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn18P56857 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn18P56857 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn18P56857 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cldn18P56857 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.8■□□□□ 0.6
Cldn18P56857 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.8■□□□□ 0.6
Cldn18P56857 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.8■□□□□ 0.6
Cldn18P56857 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn18P56857 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn18P56857 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.8■□□□□ 0.6
Cldn18P56857 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.8■□□□□ 0.6
Cldn18P56857 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Cldn18P56857 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms