Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Abcd3P55096 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Abcd3P55096 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Abcd3P55096 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Abcd3P55096 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Abcd3P55096 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcd3P55096 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcd3P55096 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.84■□□□□ 0.61
Abcd3P55096 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcd3P55096 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Abcd3P55096 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Abcd3P55096 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Abcd3P55096 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Abcd3P55096 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Abcd3P55096 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abcd3P55096 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Abcd3P55096 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Abcd3P55096 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Abcd3P55096 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.83■□□□□ 0.6
Abcd3P55096 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Abcd3P55096 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Abcd3P55096 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.82■□□□□ 0.6
Abcd3P55096 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcd3P55096 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Abcd3P55096 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Abcd3P55096 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Abcd3P55096 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Abcd3P55096 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.81■□□□□ 0.6
Abcd3P55096 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Abcd3P55096 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Abcd3P55096 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcd3P55096 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcd3P55096 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.8■□□□□ 0.6
Abcd3P55096 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcd3P55096 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.8■□□□□ 0.6
Abcd3P55096 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Abcd3P55096 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.8■□□□□ 0.6
Abcd3P55096 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcd3P55096 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.8■□□□□ 0.6
Abcd3P55096 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.8■□□□□ 0.6
Abcd3P55096 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Abcd3P55096 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcd3P55096 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Abcd3P55096 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.8■□□□□ 0.6
Abcd3P55096 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd3P55096 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd3P55096 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd3P55096 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd3P55096 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd3P55096 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.79■□□□□ 0.6
Abcd3P55096 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd3P55096 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.79■□□□□ 0.6
Abcd3P55096 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd3P55096 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd3P55096 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Abcd3P55096 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Abcd3P55096 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Abcd3P55096 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd3P55096 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Abcd3P55096 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd3P55096 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.78■□□□□ 0.6
Abcd3P55096 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Abcd3P55096 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd3P55096 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.78■□□□□ 0.6
Abcd3P55096 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd3P55096 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd3P55096 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.78■□□□□ 0.6
Abcd3P55096 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd3P55096 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd3P55096 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Abcd3P55096 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcd3P55096 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcd3P55096 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Abcd3P55096 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Abcd3P55096 Gm45444-201ENSMUST00000211394 898 ntBASIC18.77■□□□□ 0.6
Abcd3P55096 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Abcd3P55096 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Abcd3P55096 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Abcd3P55096 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Abcd3P55096 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Abcd3P55096 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd3P55096 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Abcd3P55096 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd3P55096 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.76■□□□□ 0.59
Abcd3P55096 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.76■□□□□ 0.59
Abcd3P55096 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd3P55096 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd3P55096 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Abcd3P55096 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.75■□□□□ 0.59
Abcd3P55096 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Abcd3P55096 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcd3P55096 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.75■□□□□ 0.59
Abcd3P55096 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcd3P55096 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Abcd3P55096 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd3P55096 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd3P55096 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd3P55096 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd3P55096 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Abcd3P55096 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms