Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rph3aP47708 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rph3aP47708 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Rph3aP47708 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rph3aP47708 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rph3aP47708 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rph3aP47708 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rph3aP47708 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.21■□□□□ 0.83
Rph3aP47708 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rph3aP47708 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.21■□□□□ 0.83
Rph3aP47708 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Rph3aP47708 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Rph3aP47708 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.21■□□□□ 0.83
Rph3aP47708 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rph3aP47708 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rph3aP47708 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Rph3aP47708 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rph3aP47708 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rph3aP47708 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rph3aP47708 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rph3aP47708 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rph3aP47708 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rph3aP47708 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.19■□□□□ 0.82
Rph3aP47708 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Rph3aP47708 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rph3aP47708 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Rph3aP47708 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rph3aP47708 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rph3aP47708 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rph3aP47708 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rph3aP47708 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.18■□□□□ 0.82
Rph3aP47708 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Rph3aP47708 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
Rph3aP47708 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.18■□□□□ 0.82
Rph3aP47708 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rph3aP47708 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rph3aP47708 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rph3aP47708 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rph3aP47708 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rph3aP47708 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rph3aP47708 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.17■□□□□ 0.82
Rph3aP47708 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rph3aP47708 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rph3aP47708 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.17■□□□□ 0.82
Rph3aP47708 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Rph3aP47708 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rph3aP47708 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.17■□□□□ 0.82
Rph3aP47708 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rph3aP47708 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rph3aP47708 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rph3aP47708 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rph3aP47708 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rph3aP47708 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.16■□□□□ 0.82
Rph3aP47708 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rph3aP47708 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rph3aP47708 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.16■□□□□ 0.82
Rph3aP47708 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.16■□□□□ 0.82
Rph3aP47708 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rph3aP47708 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rph3aP47708 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rph3aP47708 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
Rph3aP47708 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rph3aP47708 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.15■□□□□ 0.82
Rph3aP47708 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rph3aP47708 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Rph3aP47708 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.15■□□□□ 0.82
Rph3aP47708 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.15■□□□□ 0.82
Rph3aP47708 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.14■□□□□ 0.82
Rph3aP47708 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rph3aP47708 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rph3aP47708 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rph3aP47708 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rph3aP47708 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rph3aP47708 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Rph3aP47708 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.14■□□□□ 0.81
Rph3aP47708 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rph3aP47708 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.13■□□□□ 0.81
Rph3aP47708 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rph3aP47708 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rph3aP47708 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rph3aP47708 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rph3aP47708 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rph3aP47708 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rph3aP47708 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.12■□□□□ 0.81
Rph3aP47708 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rph3aP47708 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rph3aP47708 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rph3aP47708 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Rph3aP47708 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rph3aP47708 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
Rph3aP47708 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rph3aP47708 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rph3aP47708 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rph3aP47708 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rph3aP47708 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rph3aP47708 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rph3aP47708 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.11■□□□□ 0.81
Rph3aP47708 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.11■□□□□ 0.81
Rph3aP47708 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rph3aP47708 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms