Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sox18P43680 Mir7075-201ENSMUST00000184187 82 ntBASIC20.23■□□□□ 0.83
Sox18P43680 Gm43137-201ENSMUST00000198052 594 ntBASIC20.23■□□□□ 0.83
Sox18P43680 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sox18P43680 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.23■□□□□ 0.83
Sox18P43680 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.22■□□□□ 0.83
Sox18P43680 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox18P43680 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox18P43680 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox18P43680 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox18P43680 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.22■□□□□ 0.83
Sox18P43680 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox18P43680 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sox18P43680 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox18P43680 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sox18P43680 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sox18P43680 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox18P43680 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox18P43680 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.21■□□□□ 0.83
Sox18P43680 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox18P43680 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sox18P43680 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Sox18P43680 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox18P43680 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox18P43680 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox18P43680 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.2■□□□□ 0.82
Sox18P43680 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sox18P43680 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sox18P43680 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox18P43680 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sox18P43680 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox18P43680 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox18P43680 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox18P43680 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox18P43680 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox18P43680 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sox18P43680 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sox18P43680 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sox18P43680 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox18P43680 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox18P43680 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox18P43680 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox18P43680 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox18P43680 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox18P43680 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sox18P43680 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Sox18P43680 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.17■□□□□ 0.82
Sox18P43680 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sox18P43680 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Sox18P43680 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox18P43680 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sox18P43680 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.17■□□□□ 0.82
Sox18P43680 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sox18P43680 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
Sox18P43680 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Sox18P43680 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Sox18P43680 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox18P43680 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sox18P43680 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sox18P43680 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox18P43680 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox18P43680 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sox18P43680 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox18P43680 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sox18P43680 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox18P43680 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sox18P43680 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Sox18P43680 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Sox18P43680 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox18P43680 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.14■□□□□ 0.81
Sox18P43680 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sox18P43680 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sox18P43680 Gm8493-201ENSMUST00000196881 489 ntBASIC20.14■□□□□ 0.81
Sox18P43680 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sox18P43680 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox18P43680 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox18P43680 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sox18P43680 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox18P43680 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox18P43680 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox18P43680 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sox18P43680 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sox18P43680 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox18P43680 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sox18P43680 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sox18P43680 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox18P43680 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox18P43680 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox18P43680 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.12■□□□□ 0.81
Sox18P43680 Gm27011-201ENSMUST00000182352 972 ntBASIC20.12■□□□□ 0.81
Sox18P43680 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.12■□□□□ 0.81
Sox18P43680 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox18P43680 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sox18P43680 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox18P43680 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sox18P43680 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.11■□□□□ 0.81
Sox18P43680 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.11■□□□□ 0.81
Sox18P43680 Gm27405-201ENSMUST00000184201 112 ntBASIC20.11■□□□□ 0.81
Sox18P43680 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sox18P43680 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms