Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Foxa1P35582 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxa1P35582 Gm5812-201ENSMUST00000061073 957 ntBASIC19.51■□□□□ 0.71
Foxa1P35582 Gm10232-201ENSMUST00000089221 720 ntBASIC19.51■□□□□ 0.71
Foxa1P35582 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.5■□□□□ 0.71
Foxa1P35582 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.5■□□□□ 0.71
Foxa1P35582 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxa1P35582 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Foxa1P35582 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Foxa1P35582 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Foxa1P35582 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxa1P35582 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Foxa1P35582 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.49■□□□□ 0.71
Foxa1P35582 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Foxa1P35582 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxa1P35582 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxa1P35582 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Foxa1P35582 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxa1P35582 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Foxa1P35582 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Foxa1P35582 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxa1P35582 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Foxa1P35582 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxa1P35582 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxa1P35582 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxa1P35582 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxa1P35582 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxa1P35582 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Foxa1P35582 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.46■□□□□ 0.71
Foxa1P35582 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Foxa1P35582 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Foxa1P35582 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxa1P35582 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Foxa1P35582 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.46■□□□□ 0.71
Foxa1P35582 Gm15820-201ENSMUST00000201566 728 ntBASIC19.46■□□□□ 0.71
Foxa1P35582 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxa1P35582 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Foxa1P35582 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Foxa1P35582 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Foxa1P35582 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
Foxa1P35582 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.45■□□□□ 0.7
Foxa1P35582 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxa1P35582 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.45■□□□□ 0.7
Foxa1P35582 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.45■□□□□ 0.7
Foxa1P35582 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.45■□□□□ 0.7
Foxa1P35582 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxa1P35582 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxa1P35582 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxa1P35582 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Foxa1P35582 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxa1P35582 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxa1P35582 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Foxa1P35582 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxa1P35582 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxa1P35582 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxa1P35582 Gm15546-201ENSMUST00000122095 826 ntBASIC19.43■□□□□ 0.7
Foxa1P35582 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxa1P35582 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Foxa1P35582 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxa1P35582 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Foxa1P35582 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Foxa1P35582 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxa1P35582 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.42■□□□□ 0.7
Foxa1P35582 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxa1P35582 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.42■□□□□ 0.7
Foxa1P35582 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Foxa1P35582 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxa1P35582 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxa1P35582 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxa1P35582 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.41■□□□□ 0.7
Foxa1P35582 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxa1P35582 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.41■□□□□ 0.7
Foxa1P35582 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxa1P35582 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxa1P35582 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxa1P35582 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.4■□□□□ 0.7
Foxa1P35582 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Foxa1P35582 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxa1P35582 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Foxa1P35582 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Foxa1P35582 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Foxa1P35582 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Foxa1P35582 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Foxa1P35582 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxa1P35582 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Foxa1P35582 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.39■□□□□ 0.69
Foxa1P35582 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxa1P35582 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxa1P35582 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxa1P35582 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.39■□□□□ 0.69
Foxa1P35582 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Foxa1P35582 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Foxa1P35582 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Foxa1P35582 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.39■□□□□ 0.69
Foxa1P35582 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxa1P35582 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxa1P35582 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxa1P35582 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.38■□□□□ 0.69
Foxa1P35582 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Foxa1P35582 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms