Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thbs1P35441 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Thbs1P35441 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thbs1P35441 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thbs1P35441 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Thbs1P35441 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Thbs1P35441 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Thbs1P35441 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Thbs1P35441 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Thbs1P35441 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Thbs1P35441 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Thbs1P35441 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Thbs1P35441 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Thbs1P35441 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Thbs1P35441 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Thbs1P35441 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Thbs1P35441 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.43■□□□□ 0.7
Thbs1P35441 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Thbs1P35441 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Thbs1P35441 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Thbs1P35441 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Thbs1P35441 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Thbs1P35441 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Thbs1P35441 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Thbs1P35441 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Thbs1P35441 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Thbs1P35441 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Thbs1P35441 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Thbs1P35441 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Thbs1P35441 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Thbs1P35441 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Thbs1P35441 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Thbs1P35441 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.41■□□□□ 0.7
Thbs1P35441 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Thbs1P35441 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.41■□□□□ 0.7
Thbs1P35441 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Thbs1P35441 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Thbs1P35441 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.4■□□□□ 0.7
Thbs1P35441 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thbs1P35441 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.39■□□□□ 0.69
Thbs1P35441 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Thbs1P35441 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Thbs1P35441 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thbs1P35441 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Thbs1P35441 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Thbs1P35441 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.38■□□□□ 0.69
Thbs1P35441 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Thbs1P35441 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.38■□□□□ 0.69
Thbs1P35441 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thbs1P35441 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.38■□□□□ 0.69
Thbs1P35441 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thbs1P35441 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thbs1P35441 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thbs1P35441 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Thbs1P35441 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.37■□□□□ 0.69
Thbs1P35441 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.37■□□□□ 0.69
Thbs1P35441 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thbs1P35441 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thbs1P35441 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thbs1P35441 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thbs1P35441 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thbs1P35441 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Thbs1P35441 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Thbs1P35441 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thbs1P35441 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thbs1P35441 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Thbs1P35441 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thbs1P35441 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thbs1P35441 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Thbs1P35441 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Thbs1P35441 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Thbs1P35441 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.36■□□□□ 0.69
Thbs1P35441 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Thbs1P35441 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Thbs1P35441 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.36■□□□□ 0.69
Thbs1P35441 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Thbs1P35441 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Thbs1P35441 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Thbs1P35441 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Thbs1P35441 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Thbs1P35441 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Thbs1P35441 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.35■□□□□ 0.69
Thbs1P35441 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
Thbs1P35441 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Thbs1P35441 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thbs1P35441 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.34■□□□□ 0.69
Thbs1P35441 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Thbs1P35441 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Thbs1P35441 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Thbs1P35441 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Thbs1P35441 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Thbs1P35441 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.34■□□□□ 0.69
Thbs1P35441 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Thbs1P35441 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Thbs1P35441 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.33■□□□□ 0.68
Thbs1P35441 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.33■□□□□ 0.68
Thbs1P35441 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Thbs1P35441 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.33■□□□□ 0.68
Thbs1P35441 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Thbs1P35441 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 108.8 ms