Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.99■□□□□ 0.79
Rpl3P27659 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpl3P27659 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl3P27659 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl3P27659 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.99■□□□□ 0.79
Rpl3P27659 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl3P27659 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl3P27659 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl3P27659 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpl3P27659 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl3P27659 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl3P27659 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl3P27659 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.98■□□□□ 0.79
Rpl3P27659 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rpl3P27659 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rpl3P27659 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Rpl3P27659 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpl3P27659 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl3P27659 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpl3P27659 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.96■□□□□ 0.79
Rpl3P27659 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.96■□□□□ 0.79
Rpl3P27659 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.96■□□□□ 0.79
Rpl3P27659 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rpl3P27659 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl3P27659 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl3P27659 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rpl3P27659 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpl3P27659 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Rpl3P27659 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Rpl3P27659 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.95■□□□□ 0.78
Rpl3P27659 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rpl3P27659 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl3P27659 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl3P27659 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl3P27659 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl3P27659 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl3P27659 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl3P27659 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl3P27659 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl3P27659 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpl3P27659 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpl3P27659 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpl3P27659 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.94■□□□□ 0.78
Rpl3P27659 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpl3P27659 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpl3P27659 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpl3P27659 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpl3P27659 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpl3P27659 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rpl3P27659 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpl3P27659 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpl3P27659 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpl3P27659 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.92■□□□□ 0.78
Rpl3P27659 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rpl3P27659 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpl3P27659 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rpl3P27659 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpl3P27659 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpl3P27659 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpl3P27659 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.91■□□□□ 0.78
Rpl3P27659 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpl3P27659 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpl3P27659 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpl3P27659 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Rpl3P27659 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpl3P27659 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpl3P27659 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpl3P27659 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl3P27659 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl3P27659 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl3P27659 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Rpl3P27659 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl3P27659 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl3P27659 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl3P27659 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpl3P27659 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rpl3P27659 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpl3P27659 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.89■□□□□ 0.77
Rpl3P27659 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rpl3P27659 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Rpl3P27659 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl3P27659 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl3P27659 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rpl3P27659 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rpl3P27659 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl3P27659 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.88■□□□□ 0.77
Rpl3P27659 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rpl3P27659 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl3P27659 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl3P27659 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl3P27659 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpl3P27659 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpl3P27659 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Rpl3P27659 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Rpl3P27659 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpl3P27659 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpl3P27659 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpl3P27659 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.86■□□□□ 0.77
Rpl3P27659 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.86■□□□□ 0.77
Rpl3P27659 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms