Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.95■□□□□ 0.62
Cbx3P23198 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cbx3P23198 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cbx3P23198 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cbx3P23198 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cbx3P23198 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cbx3P23198 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cbx3P23198 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cbx3P23198 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Cbx3P23198 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cbx3P23198 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cbx3P23198 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cbx3P23198 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cbx3P23198 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cbx3P23198 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cbx3P23198 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cbx3P23198 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cbx3P23198 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cbx3P23198 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cbx3P23198 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Cbx3P23198 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cbx3P23198 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.93■□□□□ 0.62
Cbx3P23198 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cbx3P23198 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cbx3P23198 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cbx3P23198 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cbx3P23198 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.92■□□□□ 0.62
Cbx3P23198 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.92■□□□□ 0.62
Cbx3P23198 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cbx3P23198 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
Cbx3P23198 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cbx3P23198 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cbx3P23198 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cbx3P23198 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cbx3P23198 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cbx3P23198 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cbx3P23198 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cbx3P23198 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cbx3P23198 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cbx3P23198 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Cbx3P23198 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Cbx3P23198 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cbx3P23198 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cbx3P23198 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cbx3P23198 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cbx3P23198 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cbx3P23198 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cbx3P23198 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cbx3P23198 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cbx3P23198 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.9■□□□□ 0.62
Cbx3P23198 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.9■□□□□ 0.62
Cbx3P23198 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cbx3P23198 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Cbx3P23198 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cbx3P23198 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cbx3P23198 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cbx3P23198 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cbx3P23198 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.89■□□□□ 0.61
Cbx3P23198 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cbx3P23198 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cbx3P23198 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cbx3P23198 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cbx3P23198 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Cbx3P23198 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Cbx3P23198 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cbx3P23198 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cbx3P23198 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cbx3P23198 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cbx3P23198 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cbx3P23198 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cbx3P23198 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.88■□□□□ 0.61
Cbx3P23198 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.88■□□□□ 0.61
Cbx3P23198 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cbx3P23198 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cbx3P23198 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cbx3P23198 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cbx3P23198 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cbx3P23198 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cbx3P23198 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Cbx3P23198 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Cbx3P23198 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cbx3P23198 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cbx3P23198 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cbx3P23198 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cbx3P23198 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cbx3P23198 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cbx3P23198 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cbx3P23198 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cbx3P23198 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Cbx3P23198 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Cbx3P23198 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cbx3P23198 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cbx3P23198 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cbx3P23198 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cbx3P23198 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cbx3P23198 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cbx3P23198 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cbx3P23198 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cbx3P23198 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cbx3P23198 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 116 ms