Protein–RNA interactions for Protein: P10078

Zfp28, Zinc finger protein 28, mousemouse

Predictions only

Length 825 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp28P10078 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zfp28P10078 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.26■□□□□ 0.67
Zfp28P10078 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zfp28P10078 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zfp28P10078 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Zfp28P10078 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Zfp28P10078 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zfp28P10078 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zfp28P10078 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.25■□□□□ 0.67
Zfp28P10078 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zfp28P10078 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zfp28P10078 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zfp28P10078 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zfp28P10078 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.25■□□□□ 0.67
Zfp28P10078 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zfp28P10078 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Zfp28P10078 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Zfp28P10078 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Zfp28P10078 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.24■□□□□ 0.67
Zfp28P10078 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.24■□□□□ 0.67
Zfp28P10078 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.24■□□□□ 0.67
Zfp28P10078 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zfp28P10078 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zfp28P10078 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zfp28P10078 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Zfp28P10078 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.24■□□□□ 0.67
Zfp28P10078 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Zfp28P10078 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zfp28P10078 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zfp28P10078 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Zfp28P10078 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Zfp28P10078 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Zfp28P10078 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.23■□□□□ 0.67
Zfp28P10078 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.23■□□□□ 0.67
Zfp28P10078 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Zfp28P10078 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zfp28P10078 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zfp28P10078 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zfp28P10078 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Zfp28P10078 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Zfp28P10078 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Zfp28P10078 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zfp28P10078 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Zfp28P10078 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zfp28P10078 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zfp28P10078 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zfp28P10078 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Zfp28P10078 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Zfp28P10078 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zfp28P10078 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zfp28P10078 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zfp28P10078 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zfp28P10078 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zfp28P10078 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zfp28P10078 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zfp28P10078 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zfp28P10078 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Zfp28P10078 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Zfp28P10078 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zfp28P10078 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zfp28P10078 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.19■□□□□ 0.66
Zfp28P10078 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Zfp28P10078 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Zfp28P10078 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zfp28P10078 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Zfp28P10078 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Zfp28P10078 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Zfp28P10078 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.18■□□□□ 0.66
Zfp28P10078 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zfp28P10078 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.18■□□□□ 0.66
Zfp28P10078 Scarna2-201ENSMUST00000157560 414 ntBASIC19.18■□□□□ 0.66
Zfp28P10078 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.18■□□□□ 0.66
Zfp28P10078 Gm16437-201ENSMUST00000025669 507 ntBASIC19.18■□□□□ 0.66
Zfp28P10078 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Zfp28P10078 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp28P10078 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp28P10078 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp28P10078 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Zfp28P10078 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp28P10078 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp28P10078 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp28P10078 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp28P10078 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp28P10078 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp28P10078 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Zfp28P10078 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp28P10078 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.16■□□□□ 0.66
Zfp28P10078 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Zfp28P10078 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp28P10078 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp28P10078 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Zfp28P10078 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.15■□□□□ 0.66
Zfp28P10078 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp28P10078 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp28P10078 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp28P10078 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp28P10078 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp28P10078 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp28P10078 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Zfp28P10078 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms