Protein–RNA interactions for Protein: P09803

Cdh1, Cadherin-1, mousemouse

Predictions only

Length 884 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh1P09803 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh1P09803 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cdh1P09803 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdh1P09803 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Cdh1P09803 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cdh1P09803 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cdh1P09803 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cdh1P09803 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh1P09803 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh1P09803 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh1P09803 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cdh1P09803 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.29■■□□□ 1
Cdh1P09803 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh1P09803 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdh1P09803 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.29■■□□□ 1
Cdh1P09803 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh1P09803 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh1P09803 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh1P09803 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.28■■□□□ 1
Cdh1P09803 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdh1P09803 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.27■■□□□ 1
Cdh1P09803 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdh1P09803 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.27■□□□□ 0.99
Cdh1P09803 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cdh1P09803 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh1P09803 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh1P09803 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh1P09803 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.26■□□□□ 0.99
Cdh1P09803 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh1P09803 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh1P09803 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh1P09803 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdh1P09803 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Cdh1P09803 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh1P09803 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh1P09803 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh1P09803 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh1P09803 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh1P09803 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.25■□□□□ 0.99
Cdh1P09803 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh1P09803 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh1P09803 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh1P09803 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh1P09803 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Cdh1P09803 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh1P09803 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh1P09803 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cdh1P09803 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh1P09803 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh1P09803 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.24■□□□□ 0.99
Cdh1P09803 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh1P09803 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh1P09803 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh1P09803 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh1P09803 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh1P09803 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.23■□□□□ 0.99
Cdh1P09803 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.23■□□□□ 0.99
Cdh1P09803 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.23■□□□□ 0.99
Cdh1P09803 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cdh1P09803 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cdh1P09803 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.23■□□□□ 0.99
Cdh1P09803 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Cdh1P09803 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.23■□□□□ 0.99
Cdh1P09803 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Cdh1P09803 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh1P09803 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh1P09803 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh1P09803 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh1P09803 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh1P09803 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.21■□□□□ 0.99
Cdh1P09803 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cdh1P09803 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh1P09803 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh1P09803 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh1P09803 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh1P09803 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh1P09803 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.2■□□□□ 0.98
Cdh1P09803 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh1P09803 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh1P09803 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh1P09803 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.2■□□□□ 0.98
Cdh1P09803 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh1P09803 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh1P09803 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Cdh1P09803 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Cdh1P09803 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh1P09803 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh1P09803 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh1P09803 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh1P09803 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh1P09803 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh1P09803 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh1P09803 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh1P09803 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh1P09803 Gm22238-201ENSMUST00000175222 88 ntBASIC21.18■□□□□ 0.98
Cdh1P09803 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdh1P09803 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh1P09803 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh1P09803 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh1P09803 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms