Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
P06344 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
P06344 Etf1-202ENSMUST00000180351 108 ntBASIC18.79■□□□□ 0.6
P06344 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.79■□□□□ 0.6
P06344 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.79■□□□□ 0.6
P06344 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P06344 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
P06344 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P06344 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P06344 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
P06344 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
P06344 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P06344 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.78■□□□□ 0.6
P06344 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
P06344 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P06344 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P06344 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P06344 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.77■□□□□ 0.6
P06344 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P06344 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
P06344 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P06344 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.77■□□□□ 0.6
P06344 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.76■□□□□ 0.59
P06344 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P06344 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
P06344 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
P06344 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
P06344 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P06344 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
P06344 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
P06344 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P06344 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
P06344 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
P06344 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
P06344 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P06344 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.75■□□□□ 0.59
P06344 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.75■□□□□ 0.59
P06344 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P06344 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P06344 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
P06344 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.75■□□□□ 0.59
P06344 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P06344 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P06344 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.74■□□□□ 0.59
P06344 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P06344 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.74■□□□□ 0.59
P06344 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P06344 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P06344 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P06344 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P06344 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P06344 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P06344 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P06344 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.73■□□□□ 0.59
P06344 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.73■□□□□ 0.59
P06344 Gm40881-201ENSMUST00000223397 166 ntBASIC18.73■□□□□ 0.59
P06344 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P06344 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P06344 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P06344 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P06344 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.72■□□□□ 0.59
P06344 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P06344 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.72■□□□□ 0.59
P06344 Gm10399-202ENSMUST00000202768 748 ntBASIC18.72■□□□□ 0.59
P06344 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
P06344 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P06344 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P06344 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
P06344 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
P06344 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P06344 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.71■□□□□ 0.58
P06344 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
P06344 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.7■□□□□ 0.58
P06344 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.7■□□□□ 0.58
P06344 Gm7417-201ENSMUST00000192950 473 ntBASIC18.7■□□□□ 0.58
P06344 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P06344 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
P06344 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P06344 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.69■□□□□ 0.58
P06344 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P06344 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P06344 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
P06344 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
P06344 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.69■□□□□ 0.58
P06344 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P06344 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P06344 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.68■□□□□ 0.58
P06344 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
P06344 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
P06344 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.68■□□□□ 0.58
P06344 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P06344 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P06344 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P06344 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
P06344 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P06344 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
P06344 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.66■□□□□ 0.58
P06344 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P06344 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
P06344 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms