Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01852 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01852 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01852 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01852 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
P01852 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
P01852 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
P01852 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01852 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01852 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
P01852 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.18■□□□□ 0.66
P01852 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
P01852 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01852 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.18■□□□□ 0.66
P01852 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
P01852 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01852 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
P01852 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01852 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
P01852 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01852 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01852 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01852 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01852 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.16■□□□□ 0.66
P01852 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.15■□□□□ 0.66
P01852 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
P01852 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01852 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.15■□□□□ 0.66
P01852 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01852 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01852 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01852 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01852 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01852 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
P01852 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01852 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
P01852 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01852 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.14■□□□□ 0.65
P01852 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01852 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01852 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01852 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01852 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
P01852 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01852 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
P01852 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01852 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
P01852 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.13■□□□□ 0.65
P01852 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.13■□□□□ 0.65
P01852 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.13■□□□□ 0.65
P01852 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01852 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01852 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01852 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.13■□□□□ 0.65
P01852 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01852 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01852 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
P01852 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.13■□□□□ 0.65
P01852 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
P01852 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
P01852 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01852 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01852 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01852 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01852 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01852 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01852 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01852 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.12■□□□□ 0.65
P01852 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.12■□□□□ 0.65
P01852 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P01852 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01852 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01852 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P01852 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P01852 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01852 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.11■□□□□ 0.65
P01852 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
P01852 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01852 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P01852 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P01852 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
P01852 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01852 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01852 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
P01852 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01852 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01852 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01852 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01852 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01852 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01852 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01852 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01852 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01852 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.09■□□□□ 0.65
P01852 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01852 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01852 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01852 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01852 Notumos-201ENSMUST00000151998 2659 ntBASIC19.08■□□□□ 0.65
P01852 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms