Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.8□□□□□ -0.04
Sh2d1aO88890 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2d1aO88890 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2d1aO88890 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2d1aO88890 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sh2d1aO88890 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2d1aO88890 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2d1aO88890 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2d1aO88890 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2d1aO88890 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sh2d1aO88890 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2d1aO88890 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2d1aO88890 Gm10420-201ENSMUST00000121713 882 ntBASIC14.79□□□□□ -0.04
Sh2d1aO88890 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2d1aO88890 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2d1aO88890 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh2d1aO88890 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sh2d1aO88890 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sh2d1aO88890 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2d1aO88890 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2d1aO88890 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2d1aO88890 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Sh2d1aO88890 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2d1aO88890 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh2d1aO88890 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sh2d1aO88890 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.77□□□□□ -0.04
Sh2d1aO88890 Notumos-201ENSMUST00000151998 2659 ntBASIC14.77□□□□□ -0.04
Sh2d1aO88890 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh2d1aO88890 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sh2d1aO88890 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Sh2d1aO88890 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sh2d1aO88890 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh2d1aO88890 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.76□□□□□ -0.05
Sh2d1aO88890 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.76□□□□□ -0.05
Sh2d1aO88890 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.76□□□□□ -0.05
Sh2d1aO88890 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sh2d1aO88890 Cap2-205ENSMUST00000225824 1634 ntBASIC14.76□□□□□ -0.05
Sh2d1aO88890 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.76□□□□□ -0.05
Sh2d1aO88890 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sh2d1aO88890 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sh2d1aO88890 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sh2d1aO88890 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh2d1aO88890 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.75□□□□□ -0.05
Sh2d1aO88890 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.75□□□□□ -0.05
Sh2d1aO88890 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh2d1aO88890 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Sh2d1aO88890 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh2d1aO88890 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.75□□□□□ -0.05
Sh2d1aO88890 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.75□□□□□ -0.05
Sh2d1aO88890 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sh2d1aO88890 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sh2d1aO88890 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sh2d1aO88890 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Sh2d1aO88890 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Sh2d1aO88890 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh2d1aO88890 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh2d1aO88890 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sh2d1aO88890 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.74□□□□□ -0.05
Sh2d1aO88890 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Sh2d1aO88890 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.74□□□□□ -0.05
Sh2d1aO88890 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sh2d1aO88890 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh2d1aO88890 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sh2d1aO88890 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sh2d1aO88890 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sh2d1aO88890 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sh2d1aO88890 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh2d1aO88890 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh2d1aO88890 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh2d1aO88890 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh2d1aO88890 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh2d1aO88890 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sh2d1aO88890 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sh2d1aO88890 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh2d1aO88890 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sh2d1aO88890 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.73□□□□□ -0.05
Sh2d1aO88890 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.73□□□□□ -0.05
Sh2d1aO88890 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sh2d1aO88890 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.72□□□□□ -0.05
Sh2d1aO88890 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Sh2d1aO88890 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Sh2d1aO88890 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh2d1aO88890 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh2d1aO88890 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh2d1aO88890 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.71□□□□□ -0.05
Sh2d1aO88890 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sh2d1aO88890 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sh2d1aO88890 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms