Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm2O35900 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Lsm2O35900 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lsm2O35900 Gm8503-201ENSMUST00000118131 455 ntBASIC18.78■□□□□ 0.6
Lsm2O35900 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Lsm2O35900 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.78■□□□□ 0.6
Lsm2O35900 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm2O35900 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lsm2O35900 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm2O35900 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm2O35900 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.77■□□□□ 0.6
Lsm2O35900 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm2O35900 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm2O35900 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lsm2O35900 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Lsm2O35900 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lsm2O35900 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lsm2O35900 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm2O35900 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm2O35900 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm2O35900 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Lsm2O35900 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm2O35900 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm2O35900 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm2O35900 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Lsm2O35900 Golph3-202ENSMUST00000226517 2359 ntBASIC18.76■□□□□ 0.59
Lsm2O35900 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lsm2O35900 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm2O35900 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm2O35900 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm2O35900 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm2O35900 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm2O35900 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm2O35900 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm2O35900 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm2O35900 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.75■□□□□ 0.59
Lsm2O35900 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lsm2O35900 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Lsm2O35900 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm2O35900 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm2O35900 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm2O35900 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm2O35900 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm2O35900 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm2O35900 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm2O35900 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lsm2O35900 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm2O35900 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm2O35900 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm2O35900 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm2O35900 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm2O35900 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm2O35900 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm2O35900 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm2O35900 Gm44428-201ENSMUST00000204474 874 ntBASIC18.73■□□□□ 0.59
Lsm2O35900 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
Lsm2O35900 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm2O35900 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lsm2O35900 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Lsm2O35900 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm2O35900 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm2O35900 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.72■□□□□ 0.59
Lsm2O35900 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm2O35900 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lsm2O35900 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm2O35900 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Lsm2O35900 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm2O35900 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.71■□□□□ 0.59
Lsm2O35900 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.71■□□□□ 0.59
Lsm2O35900 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm2O35900 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lsm2O35900 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm2O35900 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm2O35900 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.7■□□□□ 0.58
Lsm2O35900 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Lsm2O35900 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.7■□□□□ 0.58
Lsm2O35900 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm2O35900 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm2O35900 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm2O35900 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm2O35900 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm2O35900 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lsm2O35900 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm2O35900 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm2O35900 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm2O35900 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm2O35900 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm2O35900 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.69■□□□□ 0.58
Lsm2O35900 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm2O35900 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm2O35900 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm2O35900 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm2O35900 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lsm2O35900 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Lsm2O35900 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm2O35900 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm2O35900 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm2O35900 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm2O35900 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lsm2O35900 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms