Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx8O35652 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Lhx8O35652 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx8O35652 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx8O35652 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx8O35652 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lhx8O35652 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Lhx8O35652 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx8O35652 Etf1-202ENSMUST00000180351 108 ntBASIC20.18■□□□□ 0.82
Lhx8O35652 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.18■□□□□ 0.82
Lhx8O35652 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx8O35652 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx8O35652 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lhx8O35652 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx8O35652 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx8O35652 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.17■□□□□ 0.82
Lhx8O35652 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx8O35652 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx8O35652 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx8O35652 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx8O35652 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lhx8O35652 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Lhx8O35652 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.16■□□□□ 0.82
Lhx8O35652 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx8O35652 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx8O35652 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.16■□□□□ 0.82
Lhx8O35652 Gm44428-201ENSMUST00000204474 874 ntBASIC20.16■□□□□ 0.82
Lhx8O35652 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.16■□□□□ 0.82
Lhx8O35652 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx8O35652 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.16■□□□□ 0.82
Lhx8O35652 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.16■□□□□ 0.82
Lhx8O35652 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lhx8O35652 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Lhx8O35652 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.16■□□□□ 0.82
Lhx8O35652 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx8O35652 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx8O35652 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
Lhx8O35652 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.15■□□□□ 0.82
Lhx8O35652 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.15■□□□□ 0.82
Lhx8O35652 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx8O35652 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lhx8O35652 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Lhx8O35652 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lhx8O35652 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx8O35652 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx8O35652 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lhx8O35652 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx8O35652 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx8O35652 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx8O35652 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx8O35652 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.13■□□□□ 0.81
Lhx8O35652 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.13■□□□□ 0.81
Lhx8O35652 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx8O35652 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx8O35652 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lhx8O35652 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx8O35652 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx8O35652 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx8O35652 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.12■□□□□ 0.81
Lhx8O35652 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx8O35652 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Lhx8O35652 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lhx8O35652 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lhx8O35652 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Lhx8O35652 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Lhx8O35652 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx8O35652 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx8O35652 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx8O35652 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx8O35652 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lhx8O35652 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
Lhx8O35652 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.1■□□□□ 0.81
Lhx8O35652 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.1■□□□□ 0.81
Lhx8O35652 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Lhx8O35652 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx8O35652 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx8O35652 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx8O35652 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx8O35652 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.09■□□□□ 0.81
Lhx8O35652 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx8O35652 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.09■□□□□ 0.81
Lhx8O35652 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lhx8O35652 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx8O35652 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx8O35652 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC20.08■□□□□ 0.81
Lhx8O35652 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx8O35652 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.08■□□□□ 0.81
Lhx8O35652 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx8O35652 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx8O35652 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lhx8O35652 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lhx8O35652 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lhx8O35652 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.07■□□□□ 0.8
Lhx8O35652 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.07■□□□□ 0.8
Lhx8O35652 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx8O35652 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx8O35652 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lhx8O35652 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx8O35652 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lhx8O35652 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms