Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Casp6O08738 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Casp6O08738 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Casp6O08738 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Casp6O08738 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.13■□□□□ 0.49
Casp6O08738 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Casp6O08738 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Casp6O08738 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Casp6O08738 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Casp6O08738 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Casp6O08738 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Casp6O08738 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Casp6O08738 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Casp6O08738 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Casp6O08738 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Casp6O08738 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.12■□□□□ 0.49
Casp6O08738 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Casp6O08738 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Casp6O08738 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Casp6O08738 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Casp6O08738 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Casp6O08738 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Casp6O08738 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.11■□□□□ 0.49
Casp6O08738 Gm45417-201ENSMUST00000209533 758 ntBASIC18.11■□□□□ 0.49
Casp6O08738 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Casp6O08738 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Casp6O08738 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Casp6O08738 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Casp6O08738 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Casp6O08738 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Casp6O08738 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Casp6O08738 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Casp6O08738 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.1■□□□□ 0.49
Casp6O08738 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Casp6O08738 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Casp6O08738 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Casp6O08738 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.09■□□□□ 0.49
Casp6O08738 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Casp6O08738 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Casp6O08738 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Casp6O08738 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Casp6O08738 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Casp6O08738 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Casp6O08738 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.08■□□□□ 0.49
Casp6O08738 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Casp6O08738 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Casp6O08738 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.08■□□□□ 0.48
Casp6O08738 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Casp6O08738 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Casp6O08738 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Casp6O08738 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Casp6O08738 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Casp6O08738 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.07■□□□□ 0.48
Casp6O08738 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Casp6O08738 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Casp6O08738 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Casp6O08738 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Casp6O08738 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Casp6O08738 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Casp6O08738 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.06■□□□□ 0.48
Casp6O08738 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Casp6O08738 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Casp6O08738 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Casp6O08738 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Casp6O08738 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Casp6O08738 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.05■□□□□ 0.48
Casp6O08738 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Casp6O08738 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Casp6O08738 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Casp6O08738 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Casp6O08738 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Casp6O08738 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Casp6O08738 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Casp6O08738 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
Casp6O08738 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Casp6O08738 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.04■□□□□ 0.48
Casp6O08738 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Casp6O08738 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Casp6O08738 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Casp6O08738 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casp6O08738 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Casp6O08738 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casp6O08738 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casp6O08738 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casp6O08738 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Casp6O08738 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casp6O08738 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.02■□□□□ 0.48
Casp6O08738 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casp6O08738 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casp6O08738 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casp6O08738 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Casp6O08738 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casp6O08738 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Casp6O08738 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Casp6O08738 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Casp6O08738 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.01■□□□□ 0.47
Casp6O08738 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Casp6O08738 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Casp6O08738 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Casp6O08738 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms