Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raet1cO08604 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Raet1cO08604 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raet1cO08604 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Raet1cO08604 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Raet1cO08604 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Raet1cO08604 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raet1cO08604 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Raet1cO08604 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.77■□□□□ 0.6
Raet1cO08604 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.77■□□□□ 0.6
Raet1cO08604 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Raet1cO08604 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Raet1cO08604 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Raet1cO08604 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Raet1cO08604 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.76■□□□□ 0.59
Raet1cO08604 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1cO08604 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Raet1cO08604 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.76■□□□□ 0.59
Raet1cO08604 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1cO08604 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1cO08604 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1cO08604 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1cO08604 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Raet1cO08604 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1cO08604 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Raet1cO08604 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Raet1cO08604 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.75■□□□□ 0.59
Raet1cO08604 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Raet1cO08604 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Raet1cO08604 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.75■□□□□ 0.59
Raet1cO08604 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Raet1cO08604 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Raet1cO08604 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raet1cO08604 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raet1cO08604 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Raet1cO08604 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1cO08604 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Raet1cO08604 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1cO08604 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1cO08604 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1cO08604 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1cO08604 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.73■□□□□ 0.59
Raet1cO08604 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Raet1cO08604 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1cO08604 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1cO08604 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1cO08604 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1cO08604 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.72■□□□□ 0.59
Raet1cO08604 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.72■□□□□ 0.59
Raet1cO08604 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1cO08604 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1cO08604 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Raet1cO08604 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Raet1cO08604 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1cO08604 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1cO08604 Gm45444-201ENSMUST00000211394 898 ntBASIC18.71■□□□□ 0.59
Raet1cO08604 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Raet1cO08604 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1cO08604 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.71■□□□□ 0.59
Raet1cO08604 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1cO08604 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.71■□□□□ 0.59
Raet1cO08604 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Raet1cO08604 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1cO08604 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1cO08604 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1cO08604 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1cO08604 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1cO08604 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.7■□□□□ 0.58
Raet1cO08604 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Raet1cO08604 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1cO08604 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Raet1cO08604 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.7■□□□□ 0.58
Raet1cO08604 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1cO08604 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Raet1cO08604 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1cO08604 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1cO08604 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.69■□□□□ 0.58
Raet1cO08604 Gm5921-201ENSMUST00000075898 882 ntBASIC18.69■□□□□ 0.58
Raet1cO08604 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1cO08604 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.69■□□□□ 0.58
Raet1cO08604 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Raet1cO08604 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1cO08604 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1cO08604 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Raet1cO08604 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.68■□□□□ 0.58
Raet1cO08604 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.68■□□□□ 0.58
Raet1cO08604 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1cO08604 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Raet1cO08604 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Raet1cO08604 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Raet1cO08604 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Raet1cO08604 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1cO08604 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1cO08604 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Raet1cO08604 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Raet1cO08604 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.67■□□□□ 0.58
Raet1cO08604 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Raet1cO08604 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Raet1cO08604 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Raet1cO08604 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms