Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
AlyrefO08583 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.33■■□□□ 1.01
AlyrefO08583 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.33■■□□□ 1.01
AlyrefO08583 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.33■■□□□ 1.01
AlyrefO08583 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
AlyrefO08583 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
AlyrefO08583 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.33■■□□□ 1
AlyrefO08583 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.32■■□□□ 1
AlyrefO08583 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
AlyrefO08583 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
AlyrefO08583 Gm26833-201ENSMUST00000180899 440 ntBASIC21.32■■□□□ 1
AlyrefO08583 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.32■■□□□ 1
AlyrefO08583 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
AlyrefO08583 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.32■■□□□ 1
AlyrefO08583 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
AlyrefO08583 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.32■■□□□ 1
AlyrefO08583 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.32■■□□□ 1
AlyrefO08583 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
AlyrefO08583 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.31■■□□□ 1
AlyrefO08583 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.31■■□□□ 1
AlyrefO08583 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.31■■□□□ 1
AlyrefO08583 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.31■■□□□ 1
AlyrefO08583 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
AlyrefO08583 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.3■■□□□ 1
AlyrefO08583 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
AlyrefO08583 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.3■■□□□ 1
AlyrefO08583 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
AlyrefO08583 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
AlyrefO08583 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
AlyrefO08583 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AlyrefO08583 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
AlyrefO08583 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AlyrefO08583 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
AlyrefO08583 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AlyrefO08583 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.29■■□□□ 1
AlyrefO08583 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.29■■□□□ 1
AlyrefO08583 Gm10252-201ENSMUST00000209541 832 ntBASIC21.29■■□□□ 1
AlyrefO08583 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AlyrefO08583 Gm10602-201ENSMUST00000098239 609 ntBASIC21.29■■□□□ 1
AlyrefO08583 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AlyrefO08583 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AlyrefO08583 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
AlyrefO08583 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
AlyrefO08583 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
AlyrefO08583 Nespas-201ENSMUST00000143738 1083 ntBASIC21.28■■□□□ 1
AlyrefO08583 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.28■■□□□ 1
AlyrefO08583 Gm7977-201ENSMUST00000193787 748 ntBASIC21.28■■□□□ 1
AlyrefO08583 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
AlyrefO08583 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
AlyrefO08583 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.28■■□□□ 1
AlyrefO08583 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.27■■□□□ 1
AlyrefO08583 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.27■■□□□ 1
AlyrefO08583 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.27■■□□□ 1
AlyrefO08583 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
AlyrefO08583 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
AlyrefO08583 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
AlyrefO08583 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
AlyrefO08583 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
AlyrefO08583 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
AlyrefO08583 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
AlyrefO08583 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
AlyrefO08583 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
AlyrefO08583 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
AlyrefO08583 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
AlyrefO08583 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
AlyrefO08583 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
AlyrefO08583 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AlyrefO08583 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
AlyrefO08583 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
AlyrefO08583 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
AlyrefO08583 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
AlyrefO08583 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.24■□□□□ 0.99
AlyrefO08583 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
AlyrefO08583 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.24■□□□□ 0.99
AlyrefO08583 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.24■□□□□ 0.99
AlyrefO08583 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
AlyrefO08583 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.24■□□□□ 0.99
AlyrefO08583 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
AlyrefO08583 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
AlyrefO08583 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AlyrefO08583 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
AlyrefO08583 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AlyrefO08583 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.23■□□□□ 0.99
AlyrefO08583 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
AlyrefO08583 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC21.23■□□□□ 0.99
AlyrefO08583 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.23■□□□□ 0.99
AlyrefO08583 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.23■□□□□ 0.99
AlyrefO08583 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.23■□□□□ 0.99
AlyrefO08583 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
AlyrefO08583 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
AlyrefO08583 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
AlyrefO08583 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
AlyrefO08583 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AlyrefO08583 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
AlyrefO08583 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AlyrefO08583 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
AlyrefO08583 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
AlyrefO08583 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.22■□□□□ 0.99
AlyrefO08583 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
AlyrefO08583 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms