Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc149F6V035 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.42■■□□□ 1.02
Ccdc149F6V035 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.42■■□□□ 1.02
Ccdc149F6V035 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.42■■□□□ 1.02
Ccdc149F6V035 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.42■■□□□ 1.02
Ccdc149F6V035 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc149F6V035 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc149F6V035 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ccdc149F6V035 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc149F6V035 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc149F6V035 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc149F6V035 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc149F6V035 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc149F6V035 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ccdc149F6V035 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc149F6V035 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ccdc149F6V035 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc149F6V035 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.4■■□□□ 1.02
Ccdc149F6V035 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc149F6V035 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.4■■□□□ 1.02
Ccdc149F6V035 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.4■■□□□ 1.02
Ccdc149F6V035 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.4■■□□□ 1.02
Ccdc149F6V035 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.4■■□□□ 1.02
Ccdc149F6V035 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc149F6V035 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.4■■□□□ 1.02
Ccdc149F6V035 Golgb1-201ENSMUST00000023534 498 ntBASIC21.4■■□□□ 1.02
Ccdc149F6V035 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc149F6V035 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc149F6V035 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc149F6V035 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Ccdc149F6V035 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc149F6V035 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc149F6V035 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc149F6V035 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc149F6V035 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc149F6V035 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.39■■□□□ 1.01
Ccdc149F6V035 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc149F6V035 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc149F6V035 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc149F6V035 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc149F6V035 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc149F6V035 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc149F6V035 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.38■■□□□ 1.01
Ccdc149F6V035 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.38■■□□□ 1.01
Ccdc149F6V035 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ccdc149F6V035 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc149F6V035 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc149F6V035 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc149F6V035 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc149F6V035 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.37■■□□□ 1.01
Ccdc149F6V035 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.37■■□□□ 1.01
Ccdc149F6V035 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.37■■□□□ 1.01
Ccdc149F6V035 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc149F6V035 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.36■■□□□ 1.01
Ccdc149F6V035 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc149F6V035 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc149F6V035 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc149F6V035 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc149F6V035 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ccdc149F6V035 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ccdc149F6V035 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc149F6V035 Gm12821-201ENSMUST00000120022 600 ntBASIC21.35■■□□□ 1.01
Ccdc149F6V035 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.35■■□□□ 1.01
Ccdc149F6V035 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc149F6V035 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc149F6V035 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc149F6V035 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc149F6V035 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Ccdc149F6V035 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc149F6V035 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ccdc149F6V035 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc149F6V035 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc149F6V035 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccdc149F6V035 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc149F6V035 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Ccdc149F6V035 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.33■■□□□ 1
Ccdc149F6V035 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Ccdc149F6V035 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc149F6V035 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ccdc149F6V035 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.32■■□□□ 1
Ccdc149F6V035 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc149F6V035 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ccdc149F6V035 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ccdc149F6V035 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc149F6V035 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.31■■□□□ 1
Ccdc149F6V035 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Ccdc149F6V035 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc149F6V035 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccdc149F6V035 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccdc149F6V035 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc149F6V035 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ccdc149F6V035 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ccdc149F6V035 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ccdc149F6V035 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.29■■□□□ 1
Ccdc149F6V035 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccdc149F6V035 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc149F6V035 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccdc149F6V035 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccdc149F6V035 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccdc149F6V035 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms