Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4950D3YUM8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.96■□□□□ 0.47
Gm4950D3YUM8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4950D3YUM8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm4950D3YUM8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
Gm4950D3YUM8 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Gm4950D3YUM8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm4950D3YUM8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm4950D3YUM8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm4950D3YUM8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm4950D3YUM8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm4950D3YUM8 Gm10420-201ENSMUST00000121713 882 ntBASIC17.95■□□□□ 0.46
Gm4950D3YUM8 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.95■□□□□ 0.46
Gm4950D3YUM8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.95■□□□□ 0.46
Gm4950D3YUM8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm4950D3YUM8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm4950D3YUM8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm4950D3YUM8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm4950D3YUM8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm4950D3YUM8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm4950D3YUM8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.94■□□□□ 0.46
Gm4950D3YUM8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm4950D3YUM8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Gm4950D3YUM8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Gm4950D3YUM8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Gm4950D3YUM8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm4950D3YUM8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.93■□□□□ 0.46
Gm4950D3YUM8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm4950D3YUM8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.93■□□□□ 0.46
Gm4950D3YUM8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm4950D3YUM8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Gm4950D3YUM8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Gm4950D3YUM8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm4950D3YUM8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.92■□□□□ 0.46
Gm4950D3YUM8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Gm4950D3YUM8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm4950D3YUM8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm4950D3YUM8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm4950D3YUM8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm4950D3YUM8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm4950D3YUM8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.91■□□□□ 0.46
Gm4950D3YUM8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm4950D3YUM8 Notumos-201ENSMUST00000151998 2659 ntBASIC17.91■□□□□ 0.46
Gm4950D3YUM8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm4950D3YUM8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm4950D3YUM8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm4950D3YUM8 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.91■□□□□ 0.46
Gm4950D3YUM8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm4950D3YUM8 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm4950D3YUM8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm4950D3YUM8 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm4950D3YUM8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm4950D3YUM8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm4950D3YUM8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Gm4950D3YUM8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm4950D3YUM8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm4950D3YUM8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm4950D3YUM8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.89■□□□□ 0.45
Gm4950D3YUM8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Gm4950D3YUM8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.89■□□□□ 0.45
Gm4950D3YUM8 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.89■□□□□ 0.45
Gm4950D3YUM8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.89■□□□□ 0.45
Gm4950D3YUM8 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm4950D3YUM8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm4950D3YUM8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm4950D3YUM8 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.88■□□□□ 0.45
Gm4950D3YUM8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Gm4950D3YUM8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm4950D3YUM8 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.88■□□□□ 0.45
Gm4950D3YUM8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm4950D3YUM8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm4950D3YUM8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Gm4950D3YUM8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm4950D3YUM8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm4950D3YUM8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Gm4950D3YUM8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm4950D3YUM8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm4950D3YUM8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm4950D3YUM8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm4950D3YUM8 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.87■□□□□ 0.45
Gm4950D3YUM8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Gm4950D3YUM8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm4950D3YUM8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm4950D3YUM8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gm4950D3YUM8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm4950D3YUM8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gm4950D3YUM8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms