Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Gm3880A0A1B0GSB3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Gm3880A0A1B0GSB3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Gm3880A0A1B0GSB3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Gm3880A0A1B0GSB3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Gm3880A0A1B0GSB3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Gm3880A0A1B0GSB3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm3880A0A1B0GSB3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Gm3880A0A1B0GSB3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm3880A0A1B0GSB3 Gm5112-201ENSMUST00000204407 2368 ntBASIC10.51□□□□□ -0.73
Gm3880A0A1B0GSB3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm3880A0A1B0GSB3 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm3880A0A1B0GSB3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm3880A0A1B0GSB3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm3880A0A1B0GSB3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm3880A0A1B0GSB3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm3880A0A1B0GSB3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm3880A0A1B0GSB3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm3880A0A1B0GSB3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC10.51□□□□□ -0.73
Gm3880A0A1B0GSB3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 Gm34220-201ENSMUST00000223001 2709 ntBASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm3880A0A1B0GSB3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm3880A0A1B0GSB3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm3880A0A1B0GSB3 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm3880A0A1B0GSB3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm3880A0A1B0GSB3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm3880A0A1B0GSB3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Gm3880A0A1B0GSB3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC10.49□□□□□ -0.73
Gm3880A0A1B0GSB3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm3880A0A1B0GSB3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm3880A0A1B0GSB3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Gm3880A0A1B0GSB3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Gm3880A0A1B0GSB3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Gm3880A0A1B0GSB3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms