Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Igkv3-3A0A140T8Q0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Igkv3-3A0A140T8Q0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Igkv3-3A0A140T8Q0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv3-3A0A140T8Q0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv3-3A0A140T8Q0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Igkv3-3A0A140T8Q0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Igkv3-3A0A140T8Q0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv3-3A0A140T8Q0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv3-3A0A140T8Q0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv3-3A0A140T8Q0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv3-3A0A140T8Q0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Igkv3-3A0A140T8Q0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv3-3A0A140T8Q0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Igkv3-3A0A140T8Q0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
Igkv3-3A0A140T8Q0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Igkv3-3A0A140T8Q0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-3A0A140T8Q0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-3A0A140T8Q0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-3A0A140T8Q0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-3A0A140T8Q0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-3A0A140T8Q0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-3A0A140T8Q0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Igkv3-3A0A140T8Q0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-3A0A140T8Q0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Igkv3-3A0A140T8Q0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-3A0A140T8Q0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-3A0A140T8Q0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-3A0A140T8Q0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC12.65□□□□□ -0.38
Igkv3-3A0A140T8Q0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-3A0A140T8Q0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-3A0A140T8Q0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-3A0A140T8Q0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Igkv3-3A0A140T8Q0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-3A0A140T8Q0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Igkv3-3A0A140T8Q0 Gm9910-201ENSMUST00000195385 1550 ntBASIC12.64□□□□□ -0.39
Igkv3-3A0A140T8Q0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Igkv3-3A0A140T8Q0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-3A0A140T8Q0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-3A0A140T8Q0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Igkv3-3A0A140T8Q0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC12.64□□□□□ -0.39
Igkv3-3A0A140T8Q0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-3A0A140T8Q0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-3A0A140T8Q0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-3A0A140T8Q0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-3A0A140T8Q0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Igkv3-3A0A140T8Q0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Igkv3-3A0A140T8Q0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Igkv3-3A0A140T8Q0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-3A0A140T8Q0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-3A0A140T8Q0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-3A0A140T8Q0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-3A0A140T8Q0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-3A0A140T8Q0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-3A0A140T8Q0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Igkv3-3A0A140T8Q0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Igkv3-3A0A140T8Q0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-3A0A140T8Q0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Igkv3-3A0A140T8Q0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms