Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13d-4A0A0G2JFX3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-4A0A0G2JFX3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Gm9806-201ENSMUST00000051080 552 ntBASIC14.39□□□□□ -0.11
Trav13d-4A0A0G2JFX3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.39□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav13d-4A0A0G2JFX3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC14.38□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-4A0A0G2JFX3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav13d-4A0A0G2JFX3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Gm11687-201ENSMUST00000118911 886 ntBASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav13d-4A0A0G2JFX3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-4A0A0G2JFX3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav13d-4A0A0G2JFX3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms