Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Trbv20A0A0B4J1H5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trbv20A0A0B4J1H5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv20A0A0B4J1H5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv20A0A0B4J1H5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv20A0A0B4J1H5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trbv20A0A0B4J1H5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv20A0A0B4J1H5 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv20A0A0B4J1H5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv20A0A0B4J1H5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv20A0A0B4J1H5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv20A0A0B4J1H5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv20A0A0B4J1H5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv20A0A0B4J1H5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trbv20A0A0B4J1H5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Gm6821-201ENSMUST00000107540 542 ntBASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trbv20A0A0B4J1H5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv20A0A0B4J1H5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.78■□□□□ 0.6
Trbv20A0A0B4J1H5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.78■□□□□ 0.6
Trbv20A0A0B4J1H5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trbv20A0A0B4J1H5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trbv20A0A0B4J1H5 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.77■□□□□ 0.59
Trbv20A0A0B4J1H5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Trbv20A0A0B4J1H5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trbv20A0A0B4J1H5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Golph3-202ENSMUST00000226517 2359 ntBASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trbv20A0A0B4J1H5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv20A0A0B4J1H5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv20A0A0B4J1H5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv20A0A0B4J1H5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trbv20A0A0B4J1H5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trbv20A0A0B4J1H5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms