Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-52A0A0A6YXC3 Gm15546-201ENSMUST00000122095 826 ntBASIC16.02■□□□□ 0.16
Ighv1-52A0A0A6YXC3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-52A0A0A6YXC3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ighv1-52A0A0A6YXC3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.02■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-52A0A0A6YXC3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.01■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.01■□□□□ 0.15
Ighv1-52A0A0A6YXC3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.01■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Gm15820-201ENSMUST00000201566 728 ntBASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Gm26766-202ENSMUST00000227544 2347 ntBASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Ighv1-52A0A0A6YXC3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.99■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Ighv1-52A0A0A6YXC3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.99■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.98■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.97■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.97■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.96■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Gm10399-202ENSMUST00000202768 748 ntBASIC15.96■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ighv1-52A0A0A6YXC3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.95■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Ighv1-52A0A0A6YXC3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.93■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.93■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ighv1-52A0A0A6YXC3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms