Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9d-3A0A075B695 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav9d-3A0A075B695 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-3A0A075B695 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-3A0A075B695 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.96□□□□□ -0.01
Trav9d-3A0A075B695 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-3A0A075B695 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-3A0A075B695 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC14.96□□□□□ -0.01
Trav9d-3A0A075B695 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.96□□□□□ -0.01
Trav9d-3A0A075B695 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-3A0A075B695 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav9d-3A0A075B695 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9d-3A0A075B695 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.96□□□□□ -0.02
Trav9d-3A0A075B695 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav9d-3A0A075B695 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-3A0A075B695 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-3A0A075B695 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Trav9d-3A0A075B695 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav9d-3A0A075B695 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.95□□□□□ -0.02
Trav9d-3A0A075B695 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav9d-3A0A075B695 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-3A0A075B695 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav9d-3A0A075B695 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-3A0A075B695 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-3A0A075B695 Cap2-205ENSMUST00000225824 1634 ntBASIC14.93□□□□□ -0.02
Trav9d-3A0A075B695 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-3A0A075B695 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav9d-3A0A075B695 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-3A0A075B695 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-3A0A075B695 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav9d-3A0A075B695 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trav9d-3A0A075B695 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-3A0A075B695 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-3A0A075B695 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-3A0A075B695 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav9d-3A0A075B695 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-3A0A075B695 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-3A0A075B695 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-3A0A075B695 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-3A0A075B695 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-3A0A075B695 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-3A0A075B695 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav9d-3A0A075B695 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-3A0A075B695 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-3A0A075B695 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-3A0A075B695 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-3A0A075B695 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-3A0A075B695 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-3A0A075B695 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-3A0A075B695 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav9d-3A0A075B695 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav9d-3A0A075B695 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav9d-3A0A075B695 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav9d-3A0A075B695 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav9d-3A0A075B695 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-3A0A075B695 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-3A0A075B695 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-3A0A075B695 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav9d-3A0A075B695 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-3A0A075B695 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-3A0A075B695 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-3A0A075B695 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav9d-3A0A075B695 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-3A0A075B695 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav9d-3A0A075B695 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.89□□□□□ -0.03
Trav9d-3A0A075B695 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav9d-3A0A075B695 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.89□□□□□ -0.03
Trav9d-3A0A075B695 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav9d-3A0A075B695 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-3A0A075B695 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.89□□□□□ -0.03
Trav9d-3A0A075B695 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav9d-3A0A075B695 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav9d-3A0A075B695 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav9d-3A0A075B695 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-3A0A075B695 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-3A0A075B695 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-3A0A075B695 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.88□□□□□ -0.03
Trav9d-3A0A075B695 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav9d-3A0A075B695 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-3A0A075B695 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-3A0A075B695 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-3A0A075B695 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-3A0A075B695 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav9d-3A0A075B695 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-3A0A075B695 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav9d-3A0A075B695 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms