Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.17■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.16■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Trav15-2-dv6-2A0A075B650 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Gm6311-201ENSMUST00000073790 878 ntBASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.11■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.1■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.09■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav15-2-dv6-2A0A075B650 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15-2-dv6-2A0A075B650 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms