Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav16d-dv11A0A075B617 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16d-dv11A0A075B617 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16d-dv11A0A075B617 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16d-dv11A0A075B617 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16d-dv11A0A075B617 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16d-dv11A0A075B617 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.39■□□□□ 0.05
Trav16d-dv11A0A075B617 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav16d-dv11A0A075B617 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav16d-dv11A0A075B617 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 AC153911.1-201ENSMUST00000220378 758 ntBASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav16d-dv11A0A075B617 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 Kdm3b-204ENSMUST00000224715 2032 ntBASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav16d-dv11A0A075B617 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.36■□□□□ 0.05
Trav16d-dv11A0A075B617 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16d-dv11A0A075B617 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16d-dv11A0A075B617 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.36■□□□□ 0.05
Trav16d-dv11A0A075B617 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16d-dv11A0A075B617 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16d-dv11A0A075B617 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav16d-dv11A0A075B617 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16d-dv11A0A075B617 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav16d-dv11A0A075B617 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16d-dv11A0A075B617 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav16d-dv11A0A075B617 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16d-dv11A0A075B617 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav16d-dv11A0A075B617 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16d-dv11A0A075B617 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav16d-dv11A0A075B617 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16d-dv11A0A075B617 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav16d-dv11A0A075B617 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16d-dv11A0A075B617 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav16d-dv11A0A075B617 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16d-dv11A0A075B617 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16d-dv11A0A075B617 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Trav16d-dv11A0A075B617 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16d-dv11A0A075B617 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16d-dv11A0A075B617 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16d-dv11A0A075B617 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav16d-dv11A0A075B617 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.34■□□□□ 0.05
Trav16d-dv11A0A075B617 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.33■□□□□ 0.05
Trav16d-dv11A0A075B617 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.33■□□□□ 0.05
Trav16d-dv11A0A075B617 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav16d-dv11A0A075B617 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16d-dv11A0A075B617 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.33■□□□□ 0.04
Trav16d-dv11A0A075B617 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16d-dv11A0A075B617 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav16d-dv11A0A075B617 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Gm9812-201ENSMUST00000061934 968 ntBASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav16d-dv11A0A075B617 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 Gm4799-201ENSMUST00000095396 657 ntBASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16d-dv11A0A075B617 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms