Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhga11Q91XY8 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Gm11618-201ENSMUST00000117946 267 ntBASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Gm13829-201ENSMUST00000119600 138 ntBASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Gm12291-201ENSMUST00000121627 311 ntBASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Gm17150-201ENSMUST00000165577 381 ntBASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Gm43438-201ENSMUST00000198133 379 ntBASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Gm7287-201ENSMUST00000205267 602 ntBASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhga11Q91XY8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Gm8213-201ENSMUST00000118191 441 ntBASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdhga11Q91XY8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms