Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx39aQ8VDW0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm16570-201ENSMUST00000161951 436 ntBASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm27023-201ENSMUST00000182372 285 ntBASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm3096-201ENSMUST00000185770 364 ntBASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm38317-201ENSMUST00000195564 343 ntBASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm13097-201ENSMUST00000210722 397 ntBASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm8712-201ENSMUST00000221090 701 ntBASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx39aQ8VDW0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Ddx39aQ8VDW0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx39aQ8VDW0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx39aQ8VDW0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx39aQ8VDW0 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx39aQ8VDW0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx39aQ8VDW0 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Gm14109-201ENSMUST00000118814 309 ntBASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 AA914427-201ENSMUST00000193194 1166 ntBASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx39aQ8VDW0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx39aQ8VDW0 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms