Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd109Q8R422 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cd109Q8R422 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
Cd109Q8R422 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd109Q8R422 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cd109Q8R422 Gm45643-201ENSMUST00000211364 1484 ntBASIC17.84■□□□□ 0.45
Cd109Q8R422 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cd109Q8R422 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cd109Q8R422 Gm45706-201ENSMUST00000213063 2136 ntBASIC17.83■□□□□ 0.45
Cd109Q8R422 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Cd109Q8R422 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Cd109Q8R422 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cd109Q8R422 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cd109Q8R422 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cd109Q8R422 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Cd109Q8R422 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cd109Q8R422 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Cd109Q8R422 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Cd109Q8R422 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cd109Q8R422 H2-Q3-201ENSMUST00000172583 608 ntBASIC17.83■□□□□ 0.45
Cd109Q8R422 Gm27530-201ENSMUST00000184096 98 ntBASIC17.83■□□□□ 0.45
Cd109Q8R422 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
Cd109Q8R422 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC17.83■□□□□ 0.45
Cd109Q8R422 Gm45770-201ENSMUST00000212105 616 ntBASIC17.83■□□□□ 0.45
Cd109Q8R422 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC17.83■□□□□ 0.45
Cd109Q8R422 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cd109Q8R422 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cd109Q8R422 Mir219a-1-201ENSMUST00000083621 110 ntBASIC17.83■□□□□ 0.45
Cd109Q8R422 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Cd109Q8R422 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cd109Q8R422 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC17.83■□□□□ 0.44
Cd109Q8R422 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cd109Q8R422 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cd109Q8R422 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC17.83■□□□□ 0.44
Cd109Q8R422 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC17.82■□□□□ 0.44
Cd109Q8R422 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm14058-201ENSMUST00000116082 735 ntBASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm6506-201ENSMUST00000119775 1136 ntBASIC17.82■□□□□ 0.44
Cd109Q8R422 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC17.82■□□□□ 0.44
Cd109Q8R422 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC17.82■□□□□ 0.44
Cd109Q8R422 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC17.82■□□□□ 0.44
Cd109Q8R422 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm9211-201ENSMUST00000182882 975 ntBASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC17.82■□□□□ 0.44
Cd109Q8R422 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC17.82■□□□□ 0.44
Cd109Q8R422 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm18038-201ENSMUST00000197900 485 ntBASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm45118-201ENSMUST00000208928 825 ntBASIC17.82■□□□□ 0.44
Cd109Q8R422 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm270-201ENSMUST00000223010 976 ntBASIC17.82■□□□□ 0.44
Cd109Q8R422 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC17.82■□□□□ 0.44
Cd109Q8R422 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cd109Q8R422 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC17.82■□□□□ 0.44
Cd109Q8R422 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cd109Q8R422 Zkscan3-207ENSMUST00000223831 2101 ntBASIC17.82■□□□□ 0.44
Cd109Q8R422 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.81■□□□□ 0.44
Cd109Q8R422 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.81■□□□□ 0.44
Cd109Q8R422 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 AC154276.3-201ENSMUST00000227643 998 ntBASIC17.81■□□□□ 0.44
Cd109Q8R422 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC17.81■□□□□ 0.44
Cd109Q8R422 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Gm9062-201ENSMUST00000117712 727 ntBASIC17.81■□□□□ 0.44
Cd109Q8R422 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Cd109Q8R422 Gm18556-201ENSMUST00000219748 1031 ntBASIC17.81■□□□□ 0.44
Cd109Q8R422 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cd109Q8R422 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cd109Q8R422 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC17.8■□□□□ 0.44
Cd109Q8R422 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cd109Q8R422 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Cd109Q8R422 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd109Q8R422 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cd109Q8R422 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms