Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc116Q80X53 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc116Q80X53 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ccdc116Q80X53 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc116Q80X53 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc116Q80X53 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc116Q80X53 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc116Q80X53 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc116Q80X53 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc116Q80X53 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc116Q80X53 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc116Q80X53 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ccdc116Q80X53 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Gm14921-201ENSMUST00000118643 908 ntBASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Gm16296-201ENSMUST00000159905 325 ntBASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Gm23363-201ENSMUST00000175024 79 ntBASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Gm8099-201ENSMUST00000200510 742 ntBASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Gm43275-201ENSMUST00000202053 1020 ntBASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Matn2-203ENSMUST00000226766 3252 ntBASIC12.45□□□□□ -0.42
Ccdc116Q80X53 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ccdc116Q80X53 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Gm27486-201ENSMUST00000184923 80 ntBASIC12.44□□□□□ -0.42
Ccdc116Q80X53 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Thoc7-209ENSMUST00000225325 765 ntBASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ccdc116Q80X53 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc116Q80X53 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms