Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.55□□□□□ -0.24
ShbQ6PD21 Gm16166-201ENSMUST00000118291 787 ntBASIC13.55□□□□□ -0.24
ShbQ6PD21 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.55□□□□□ -0.24
ShbQ6PD21 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.55□□□□□ -0.24
ShbQ6PD21 Gm8531-201ENSMUST00000188319 893 ntBASIC13.55□□□□□ -0.24
ShbQ6PD21 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC13.55□□□□□ -0.24
ShbQ6PD21 Gm17877-201ENSMUST00000192578 814 ntBASIC13.55□□□□□ -0.24
ShbQ6PD21 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.55□□□□□ -0.24
ShbQ6PD21 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.55□□□□□ -0.24
ShbQ6PD21 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.55□□□□□ -0.24
ShbQ6PD21 AC154257.1-202ENSMUST00000224729 843 ntBASIC13.55□□□□□ -0.24
ShbQ6PD21 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
ShbQ6PD21 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.55□□□□□ -0.24
ShbQ6PD21 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.55□□□□□ -0.24
ShbQ6PD21 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.55□□□□□ -0.24
ShbQ6PD21 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.55□□□□□ -0.24
ShbQ6PD21 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ShbQ6PD21 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.54□□□□□ -0.24
ShbQ6PD21 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
ShbQ6PD21 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.54□□□□□ -0.24
ShbQ6PD21 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.54□□□□□ -0.24
ShbQ6PD21 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.54□□□□□ -0.24
ShbQ6PD21 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC13.54□□□□□ -0.24
ShbQ6PD21 Gm4862-201ENSMUST00000170405 438 ntBASIC13.54□□□□□ -0.24
ShbQ6PD21 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.54□□□□□ -0.24
ShbQ6PD21 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
ShbQ6PD21 Gm42779-201ENSMUST00000198807 406 ntBASIC13.54□□□□□ -0.24
ShbQ6PD21 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.54□□□□□ -0.24
ShbQ6PD21 Gm44552-201ENSMUST00000205458 1247 ntBASIC13.54□□□□□ -0.24
ShbQ6PD21 Gm45594-201ENSMUST00000211717 241 ntBASIC13.54□□□□□ -0.24
ShbQ6PD21 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.54□□□□□ -0.24
ShbQ6PD21 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.54□□□□□ -0.24
ShbQ6PD21 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ShbQ6PD21 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ShbQ6PD21 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.54□□□□□ -0.24
ShbQ6PD21 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
ShbQ6PD21 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.53□□□□□ -0.24
ShbQ6PD21 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ShbQ6PD21 Gm22711-201ENSMUST00000116890 133 ntBASIC13.53□□□□□ -0.24
ShbQ6PD21 Gm8731-201ENSMUST00000118088 412 ntBASIC13.53□□□□□ -0.24
ShbQ6PD21 Gm7541-201ENSMUST00000118361 535 ntBASIC13.53□□□□□ -0.24
ShbQ6PD21 Gm11836-201ENSMUST00000121022 441 ntBASIC13.53□□□□□ -0.24
ShbQ6PD21 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.53□□□□□ -0.24
ShbQ6PD21 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ShbQ6PD21 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ShbQ6PD21 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms