Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Gm9211-201ENSMUST00000182882 975 ntBASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Rprl1-202ENSMUST00000198476 238 ntBASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ddx49Q4FZF3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ddx49Q4FZF3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Gm17040-202ENSMUST00000170597 889 ntBASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ddx49Q4FZF3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx49Q4FZF3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx49Q4FZF3 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx49Q4FZF3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx49Q4FZF3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx49Q4FZF3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms