Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.74□□□□□ -0.53
CMC4P56277 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
CMC4P56277 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 SRD5A3P1-201ENST00000603021 949 ntBASIC11.74□□□□□ -0.53
CMC4P56277 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
CMC4P56277 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CMC4P56277 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
CMC4P56277 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
CMC4P56277 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CMC4P56277 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
CMC4P56277 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CMC4P56277 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
CMC4P56277 DOC2GP-204ENST00000639052 2548 ntBASIC11.74□□□□□ -0.53
CMC4P56277 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CMC4P56277 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC11.73□□□□□ -0.53
CMC4P56277 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.73□□□□□ -0.53
CMC4P56277 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CMC4P56277 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.73□□□□□ -0.53
CMC4P56277 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 DFFBP1-201ENST00000433250 979 ntBASIC11.73□□□□□ -0.53
CMC4P56277 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.73□□□□□ -0.53
CMC4P56277 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 NME4-207ENST00000450036 985 ntTSL 3 BASIC11.73□□□□□ -0.53
CMC4P56277 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.73□□□□□ -0.53
CMC4P56277 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.73□□□□□ -0.53
CMC4P56277 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.73□□□□□ -0.53
CMC4P56277 KRT18P43-201ENST00000469825 1281 ntBASIC11.73□□□□□ -0.53
CMC4P56277 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.73□□□□□ -0.53
CMC4P56277 TERF1P3-201ENST00000505638 1227 ntBASIC11.73□□□□□ -0.53
CMC4P56277 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
CMC4P56277 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CMC4P56277 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.73□□□□□ -0.53
CMC4P56277 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.73□□□□□ -0.53
CMC4P56277 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.73□□□□□ -0.53
CMC4P56277 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC11.73□□□□□ -0.53
CMC4P56277 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
CMC4P56277 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
CMC4P56277 RARRES2P5-201ENST00000564013 466 ntBASIC11.73□□□□□ -0.53
CMC4P56277 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC11.73□□□□□ -0.53
CMC4P56277 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.73□□□□□ -0.53
CMC4P56277 MIR4745-201ENST00000577608 62 ntBASIC11.73□□□□□ -0.53
CMC4P56277 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.73□□□□□ -0.53
CMC4P56277 MIR4313-201ENST00000580760 101 ntBASIC11.73□□□□□ -0.53
CMC4P56277 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 AC024909.3-201ENST00000611513 2257 ntBASIC11.73□□□□□ -0.53
CMC4P56277 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.73□□□□□ -0.53
CMC4P56277 AL607033.1-201ENST00000623900 1599 ntBASIC11.73□□□□□ -0.53
CMC4P56277 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
CMC4P56277 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.73□□□□□ -0.53
CMC4P56277 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 AL365209.1-201ENST00000624418 6473 ntBASIC11.73□□□□□ -0.53
CMC4P56277 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CMC4P56277 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CMC4P56277 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms