Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.64□□□□□ -0.39
Atxn1P54254 Gm6447-201ENSMUST00000118905 835 ntBASIC12.64□□□□□ -0.39
Atxn1P54254 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Gm19459-201ENSMUST00000176240 835 ntBASIC12.64□□□□□ -0.39
Atxn1P54254 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Mir6958-201ENSMUST00000184207 73 ntBASIC12.64□□□□□ -0.39
Atxn1P54254 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.64□□□□□ -0.39
Atxn1P54254 Gm8885-201ENSMUST00000189382 598 ntBASIC12.64□□□□□ -0.39
Atxn1P54254 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.64□□□□□ -0.39
Atxn1P54254 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.64□□□□□ -0.39
Atxn1P54254 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.64□□□□□ -0.39
Atxn1P54254 Spcs1-203ENSMUST00000226374 592 ntBASIC12.64□□□□□ -0.39
Atxn1P54254 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Atxn1P54254 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Atxn1P54254 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.64□□□□□ -0.39
Atxn1P54254 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atxn1P54254 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Atxn1P54254 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.63□□□□□ -0.39
Atxn1P54254 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.63□□□□□ -0.39
Atxn1P54254 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.63□□□□□ -0.39
Atxn1P54254 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.63□□□□□ -0.39
Atxn1P54254 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.63□□□□□ -0.39
Atxn1P54254 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Atxn1P54254 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Atxn1P54254 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Atxn1P54254 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Atxn1P54254 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.63□□□□□ -0.39
Atxn1P54254 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.63□□□□□ -0.39
Atxn1P54254 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.63□□□□□ -0.39
Atxn1P54254 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.63□□□□□ -0.39
Atxn1P54254 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Atxn1P54254 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atxn1P54254 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Atxn1P54254 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.62□□□□□ -0.39
Atxn1P54254 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Atxn1P54254 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Atxn1P54254 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms