Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TgfaP48030 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TgfaP48030 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TgfaP48030 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
TgfaP48030 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
TgfaP48030 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.03□□□□□ -0.64
TgfaP48030 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
TgfaP48030 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TgfaP48030 Gm15432-201ENSMUST00000121106 195 ntBASIC11.03□□□□□ -0.64
TgfaP48030 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.03□□□□□ -0.64
TgfaP48030 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.03□□□□□ -0.64
TgfaP48030 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TgfaP48030 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.03□□□□□ -0.64
TgfaP48030 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.03□□□□□ -0.64
TgfaP48030 Gm28071-201ENSMUST00000190355 478 ntBASIC11.03□□□□□ -0.64
TgfaP48030 Gm19187-201ENSMUST00000206781 892 ntBASIC11.03□□□□□ -0.64
TgfaP48030 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.03□□□□□ -0.64
TgfaP48030 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.03□□□□□ -0.64
TgfaP48030 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TgfaP48030 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.03□□□□□ -0.64
TgfaP48030 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TgfaP48030 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
TgfaP48030 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TgfaP48030 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TgfaP48030 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
TgfaP48030 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TgfaP48030 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TgfaP48030 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
TgfaP48030 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
TgfaP48030 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
TgfaP48030 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
TgfaP48030 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
TgfaP48030 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
TgfaP48030 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
TgfaP48030 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.02□□□□□ -0.64
TgfaP48030 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
TgfaP48030 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
TgfaP48030 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.02□□□□□ -0.65
TgfaP48030 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.02□□□□□ -0.65
TgfaP48030 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.02□□□□□ -0.65
TgfaP48030 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.02□□□□□ -0.65
TgfaP48030 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Ntng1-201ENSMUST00000051253 327 ntBASIC11.02□□□□□ -0.65
TgfaP48030 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
TgfaP48030 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.02□□□□□ -0.65
TgfaP48030 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
TgfaP48030 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.02□□□□□ -0.65
TgfaP48030 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.02□□□□□ -0.65
TgfaP48030 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
TgfaP48030 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
TgfaP48030 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
TgfaP48030 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.02□□□□□ -0.65
TgfaP48030 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
TgfaP48030 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.01□□□□□ -0.65
TgfaP48030 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TgfaP48030 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
TgfaP48030 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
TgfaP48030 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TgfaP48030 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
TgfaP48030 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
TgfaP48030 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms