Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
Hoxc9P09633 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.36■□□□□ 0.21
Hoxc9P09633 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Hoxc9P09633 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Gm9550-201ENSMUST00000161130 862 ntBASIC16.36■□□□□ 0.21
Hoxc9P09633 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC16.36■□□□□ 0.21
Hoxc9P09633 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC16.36■□□□□ 0.21
Hoxc9P09633 Gm19353-201ENSMUST00000184561 445 ntBASIC16.36■□□□□ 0.21
Hoxc9P09633 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC16.36■□□□□ 0.21
Hoxc9P09633 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC16.36■□□□□ 0.21
Hoxc9P09633 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.36■□□□□ 0.21
Hoxc9P09633 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.36■□□□□ 0.21
Hoxc9P09633 Gm5525-201ENSMUST00000190438 1312 ntBASIC16.36■□□□□ 0.21
Hoxc9P09633 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Hoxc9P09633 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Hoxc9P09633 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Hoxc9P09633 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Hoxc9P09633 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Hoxc9P09633 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Matn2-206ENSMUST00000228570 2798 ntBASIC16.35■□□□□ 0.21
Hoxc9P09633 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Gm22133-201ENSMUST00000102082 109 ntBASIC16.35■□□□□ 0.21
Hoxc9P09633 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC16.35■□□□□ 0.21
Hoxc9P09633 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC16.35■□□□□ 0.21
Hoxc9P09633 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC16.35■□□□□ 0.21
Hoxc9P09633 Gm7467-201ENSMUST00000185173 652 ntBASIC16.35■□□□□ 0.21
Hoxc9P09633 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.35■□□□□ 0.21
Hoxc9P09633 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC16.35■□□□□ 0.21
Hoxc9P09633 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Hoxc9P09633 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Hoxc9P09633 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Hoxc9P09633 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.34■□□□□ 0.21
Hoxc9P09633 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC16.34■□□□□ 0.21
Hoxc9P09633 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Hoxc9P09633 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC16.34■□□□□ 0.21
Hoxc9P09633 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Gm13035-201ENSMUST00000117496 342 ntBASIC16.34■□□□□ 0.21
Hoxc9P09633 Gm6506-201ENSMUST00000119775 1136 ntBASIC16.34■□□□□ 0.21
Hoxc9P09633 Gm13408-201ENSMUST00000119822 798 ntBASIC16.34■□□□□ 0.21
Hoxc9P09633 Gm14760-201ENSMUST00000121831 999 ntBASIC16.34■□□□□ 0.21
Hoxc9P09633 Gm13935-201ENSMUST00000121859 798 ntBASIC16.34■□□□□ 0.21
Hoxc9P09633 Gm5732-201ENSMUST00000182596 1007 ntBASIC16.34■□□□□ 0.21
Hoxc9P09633 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC16.34■□□□□ 0.21
Hoxc9P09633 Gm37835-201ENSMUST00000193305 361 ntBASIC16.34■□□□□ 0.21
Hoxc9P09633 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Hoxc9P09633 Gm13812-201ENSMUST00000118061 1347 ntBASIC16.34■□□□□ 0.21
Hoxc9P09633 Gm13810-201ENSMUST00000118584 1347 ntBASIC16.34■□□□□ 0.21
Hoxc9P09633 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Hoxc9P09633 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Hoxc9P09633 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Hoxc9P09633 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hoxc9P09633 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Hoxc9P09633 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hoxc9P09633 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hoxc9P09633 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Hoxc9P09633 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms