Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hcn1O88704 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.19□□□□□ -0.46
Hcn1O88704 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.19□□□□□ -0.46
Hcn1O88704 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.19□□□□□ -0.46
Hcn1O88704 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hcn1O88704 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hcn1O88704 Gm16202-201ENSMUST00000117532 544 ntBASIC12.19□□□□□ -0.46
Hcn1O88704 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.19□□□□□ -0.46
Hcn1O88704 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.19□□□□□ -0.46
Hcn1O88704 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.19□□□□□ -0.46
Hcn1O88704 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Hcn1O88704 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hcn1O88704 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hcn1O88704 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.18□□□□□ -0.46
Hcn1O88704 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hcn1O88704 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.18□□□□□ -0.46
Hcn1O88704 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hcn1O88704 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.18□□□□□ -0.46
Hcn1O88704 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Gm11618-201ENSMUST00000117946 267 ntBASIC12.18□□□□□ -0.46
Hcn1O88704 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.18□□□□□ -0.46
Hcn1O88704 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Gm27331-201ENSMUST00000183705 60 ntBASIC12.18□□□□□ -0.46
Hcn1O88704 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.18□□□□□ -0.46
Hcn1O88704 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.18□□□□□ -0.46
Hcn1O88704 Gm44069-201ENSMUST00000204898 506 ntBASIC12.18□□□□□ -0.46
Hcn1O88704 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.18□□□□□ -0.46
Hcn1O88704 Gm29705-201ENSMUST00000212598 474 ntBASIC12.18□□□□□ -0.46
Hcn1O88704 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.18□□□□□ -0.46
Hcn1O88704 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.18□□□□□ -0.46
Hcn1O88704 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Hcn1O88704 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.18□□□□□ -0.46
Hcn1O88704 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hcn1O88704 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hcn1O88704 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hcn1O88704 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hcn1O88704 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.17□□□□□ -0.46
Hcn1O88704 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hcn1O88704 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms