Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.23□□□□□ -0.29
Ttc3O88196 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Gm23949-201ENSMUST00000104027 127 ntBASIC13.23□□□□□ -0.29
Ttc3O88196 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.23□□□□□ -0.29
Ttc3O88196 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.23□□□□□ -0.29
Ttc3O88196 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ttc3O88196 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.22□□□□□ -0.29
Ttc3O88196 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Ttc3O88196 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ttc3O88196 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ttc3O88196 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Ttc3O88196 Gm12566-201ENSMUST00000121479 359 ntBASIC13.22□□□□□ -0.29
Ttc3O88196 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.22□□□□□ -0.29
Ttc3O88196 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.22□□□□□ -0.29
Ttc3O88196 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Ttc3O88196 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.22□□□□□ -0.29
Ttc3O88196 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.22□□□□□ -0.29
Ttc3O88196 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.22□□□□□ -0.29
Ttc3O88196 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.22□□□□□ -0.29
Ttc3O88196 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ttc3O88196 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.21□□□□□ -0.29
Ttc3O88196 Gm23699-201ENSMUST00000158835 135 ntBASIC13.21□□□□□ -0.29
Ttc3O88196 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.21□□□□□ -0.29
Ttc3O88196 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ttc3O88196 Gm28882-201ENSMUST00000185504 314 ntBASIC13.21□□□□□ -0.29
Ttc3O88196 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ttc3O88196 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.21□□□□□ -0.29
Ttc3O88196 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.21□□□□□ -0.29
Ttc3O88196 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.21□□□□□ -0.29
Ttc3O88196 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.21□□□□□ -0.29
Ttc3O88196 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ttc3O88196 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.21□□□□□ -0.29
Ttc3O88196 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.21□□□□□ -0.29
Ttc3O88196 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ttc3O88196 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ttc3O88196 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ttc3O88196 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ttc3O88196 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.21□□□□□ -0.3
Ttc3O88196 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ttc3O88196 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ttc3O88196 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ttc3O88196 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.2□□□□□ -0.3
Ttc3O88196 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ttc3O88196 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.2□□□□□ -0.3
Ttc3O88196 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms