Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Gm1848-201ENSMUST00000120711 789 ntBASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Gm12516-201ENSMUST00000120819 385 ntBASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Gm37458-201ENSMUST00000194055 410 ntBASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Gm43186-201ENSMUST00000198130 824 ntBASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Gm8956-201ENSMUST00000203939 825 ntBASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Gm45575-201ENSMUST00000210283 548 ntBASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Gm18636-201ENSMUST00000218846 1066 ntBASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 AC134860.1-201ENSMUST00000224867 660 ntBASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Mirlet7i-201ENSMUST00000083472 85 ntBASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hfm1D3Z4R1 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gm44891-201ENSMUST00000208817 2223 ntBASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gm16166-201ENSMUST00000118291 787 ntBASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gm8737-201ENSMUST00000122208 642 ntBASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gm44270-201ENSMUST00000203084 1234 ntBASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Hfm1D3Z4R1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hfm1D3Z4R1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hfm1D3Z4R1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hfm1D3Z4R1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.52■□□□□ 0.39
Hfm1D3Z4R1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hfm1D3Z4R1 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Hfm1D3Z4R1 Gm7114-201ENSMUST00000190159 1789 ntBASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 n-R5s64-201ENSMUST00000102019 119 ntBASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Gm22711-201ENSMUST00000116890 133 ntBASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Gm8731-201ENSMUST00000118088 412 ntBASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Gm38228-201ENSMUST00000193169 1293 ntBASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Ighv5-11-201ENSMUST00000193354 371 ntBASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Gm3793-201ENSMUST00000204973 672 ntBASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Gm6430-201ENSMUST00000054664 1248 ntBASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hfm1D3Z4R1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Hfm1D3Z4R1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms