Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc194A0A140LIT1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Gm8213-201ENSMUST00000118191 441 ntBASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Gm14921-201ENSMUST00000118643 908 ntBASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Gm25927-201ENSMUST00000175058 117 ntBASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Gm37922-201ENSMUST00000195596 455 ntBASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Gm7287-201ENSMUST00000205267 602 ntBASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc194A0A140LIT1 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Gm11918-201ENSMUST00000121660 179 ntBASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc194A0A140LIT1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms