Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf40aQ9R1C7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Mir686-201ENSMUST00000102174 109 ntBASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Gm22119-201ENSMUST00000175594 99 ntBASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Gm10146-201ENSMUST00000072739 309 ntBASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Prpf40aQ9R1C7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Prpf40aQ9R1C7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf40aQ9R1C7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf40aQ9R1C7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf40aQ9R1C7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf40aQ9R1C7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf40aQ9R1C7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf40aQ9R1C7 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf40aQ9R1C7 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf40aQ9R1C7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.02□□□□□ -0.16
Prpf40aQ9R1C7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Prpf40aQ9R1C7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Gm5186-201ENSMUST00000218781 920 ntBASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Prpf40aQ9R1C7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Prpf40aQ9R1C7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms