Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rtn4Q99P72 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Gm5530-201ENSMUST00000117185 985 ntBASIC16.76■□□□□ 0.27
Rtn4Q99P72 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.76■□□□□ 0.27
Rtn4Q99P72 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC16.76■□□□□ 0.27
Rtn4Q99P72 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.76■□□□□ 0.27
Rtn4Q99P72 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Arl14ep-202ENSMUST00000093883 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rtn4Q99P72 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.75■□□□□ 0.27
Rtn4Q99P72 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Gm14660-201ENSMUST00000119809 575 ntBASIC16.75■□□□□ 0.27
Rtn4Q99P72 Gm11803-201ENSMUST00000119966 444 ntBASIC16.75■□□□□ 0.27
Rtn4Q99P72 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Gm6152-201ENSMUST00000151704 340 ntBASIC16.75■□□□□ 0.27
Rtn4Q99P72 Gm24644-201ENSMUST00000157114 139 ntBASIC16.75■□□□□ 0.27
Rtn4Q99P72 Gm17046-201ENSMUST00000168078 850 ntBASIC16.75■□□□□ 0.27
Rtn4Q99P72 Gm8810-201ENSMUST00000172895 754 ntBASIC16.75■□□□□ 0.27
Rtn4Q99P72 Gm28926-201ENSMUST00000191063 680 ntBASIC16.75■□□□□ 0.27
Rtn4Q99P72 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.75■□□□□ 0.27
Rtn4Q99P72 AC164597.1-201ENSMUST00000226538 514 ntBASIC16.75■□□□□ 0.27
Rtn4Q99P72 AC115357.1-201ENSMUST00000227575 466 ntBASIC16.75■□□□□ 0.27
Rtn4Q99P72 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 AC132384.4-201ENSMUST00000220343 1397 ntBASIC16.75■□□□□ 0.27
Rtn4Q99P72 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rtn4Q99P72 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4Q99P72 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rtn4Q99P72 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
Rtn4Q99P72 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rtn4Q99P72 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms