Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm15432-201ENSMUST00000121106 195 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm29615-201ENSMUST00000185371 697 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm28224-201ENSMUST00000186078 697 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm29001-201ENSMUST00000186177 697 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm28292-201ENSMUST00000186593 697 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm28101-201ENSMUST00000187608 697 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm29076-201ENSMUST00000187689 697 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm28302-201ENSMUST00000187931 697 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm28646-201ENSMUST00000188220 697 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm28205-201ENSMUST00000189177 697 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm29032-201ENSMUST00000189797 697 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm28695-201ENSMUST00000190300 697 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm37448-201ENSMUST00000192795 697 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Ntng1-201ENSMUST00000051253 327 ntBASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx6-1Q99MA9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Gm43058-201ENSMUST00000197645 625 ntBASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Gm44882-201ENSMUST00000205702 802 ntBASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx6-1Q99MA9 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms