Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 AC159205.7-201ENSMUST00000225988 692 ntBASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Gm44286-201ENSMUST00000204098 1487 ntBASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Gm26474-201ENSMUST00000116762 122 ntBASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Gm9522-201ENSMUST00000182394 926 ntBASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb3Q91XZ7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Gm29288-201ENSMUST00000191582 901 ntBASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb3Q91XZ7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms