Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Tmc1Q8R4P5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tmc1Q8R4P5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tmc1Q8R4P5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.58■□□□□ 0.09
Tmc1Q8R4P5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tmc1Q8R4P5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tmc1Q8R4P5 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tmc1Q8R4P5 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Gm4984-201ENSMUST00000115987 360 ntBASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Gm42599-201ENSMUST00000201308 469 ntBASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tmc1Q8R4P5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Mir1894-201ENSMUST00000122802 81 ntBASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Gm42550-201ENSMUST00000201553 960 ntBASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Gm17794-201ENSMUST00000220252 955 ntBASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tmc1Q8R4P5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tmc1Q8R4P5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.56■□□□□ 0.08
Tmc1Q8R4P5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tmc1Q8R4P5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tmc1Q8R4P5 Gm43174-201ENSMUST00000195914 2445 ntBASIC15.56■□□□□ 0.08
Tmc1Q8R4P5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Tmc1Q8R4P5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tmc1Q8R4P5 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tmc1Q8R4P5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tmc1Q8R4P5 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms