Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc28bQ8CEG5 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gm9630-201ENSMUST00000178304 885 ntBASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gm2756-201ENSMUST00000195851 400 ntBASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gm26315-201ENSMUST00000083890 321 ntBASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ccdc28bQ8CEG5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc28bQ8CEG5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc28bQ8CEG5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ccdc28bQ8CEG5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Gm11594-201ENSMUST00000122313 162 ntBASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Gm5279-201ENSMUST00000199575 745 ntBASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Gm42550-201ENSMUST00000201553 960 ntBASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.58□□□□□ -0.4
Ccdc28bQ8CEG5 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc28bQ8CEG5 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms