Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Gm13665-201ENSMUST00000120830 528 ntBASIC13.5□□□□□ -0.25
Rd3Q8BRE0 B9d1os-201ENSMUST00000137010 674 ntBASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.5□□□□□ -0.25
Rd3Q8BRE0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Gm19208-201ENSMUST00000213861 912 ntBASIC13.5□□□□□ -0.25
Rd3Q8BRE0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Rd3Q8BRE0 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Gm13736-201ENSMUST00000119272 253 ntBASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Mir6979-201ENSMUST00000183927 56 ntBASIC13.49□□□□□ -0.25
Rd3Q8BRE0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.49□□□□□ -0.25
Rd3Q8BRE0 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Rd3Q8BRE0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Gm27023-201ENSMUST00000182372 285 ntBASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Mir6927-201ENSMUST00000184494 71 ntBASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rd3Q8BRE0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms