Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm12613-201ENSMUST00000180323 382 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm28450-201ENSMUST00000187349 638 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm44100-201ENSMUST00000204329 436 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Prpf40bQ80W14 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Gm3508-201ENSMUST00000186012 792 ntBASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Gm45118-201ENSMUST00000208928 825 ntBASIC14.72□□□□□ -0.05
Prpf40bQ80W14 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Prpf40bQ80W14 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.71□□□□□ -0.05
Prpf40bQ80W14 AA914427-201ENSMUST00000193194 1166 ntBASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Prpf40bQ80W14 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf40bQ80W14 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf40bQ80W14 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf40bQ80W14 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf40bQ80W14 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf40bQ80W14 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.71□□□□□ -0.06
Prpf40bQ80W14 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Prpf40bQ80W14 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40bQ80W14 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Prpf40bQ80W14 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Prpf40bQ80W14 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms